Hi, all
I'm new here.
These days I'm trying to add a tool in Galaxy, as showed in screencast.
I did the same thing with that in screencast. But an error occurred.
The error says:
tool error
An error occurred running this job:failure preparing job
The message in the terminal says:
galaxy.jobs.handler DEBUG 2012-12-29 15:54:25,504 dispatching job 7 to local
runner
galaxy.jobs.handler INFO 2012-12-29 15:54:25,733 (7) Job dispatched
galaxy.jobs.runners.local DEBUG 2012-12-29 15:54:25,818 Local runner: starting
job 7
galaxy.jobs.runners.local ERROR 2012-12-29 15:54:26,061 failure running job 7
Traceback (most recent call last):
File
"/home/tanjun/galaxy/galaxy-galaxy-dist-36ad8aa7b922/lib/galaxy/jobs/runners/local.py",
line 72, in run_job
job_wrapper.prepare()
File
"/home/tanjun/galaxy/galaxy-galaxy-dist-36ad8aa7b922/lib/galaxy/jobs/__init__.py",
line 180, in prepare
config_filenames = self.tool.build_config_files( param_dict,
self.working_directory )
File
"/home/tanjun/galaxy/galaxy-galaxy-dist-36ad8aa7b922/lib/galaxy/tools/__init__.py",
line 2430, in build_config_files
f.write( fill_template( template_text, context=param_dict ) )
File
"/home/tanjun/galaxy/galaxy-galaxy-dist-36ad8aa7b922/lib/galaxy/util/template.py",
line 9, in fill_template
return str( Template( source=template_text, searchList=[context] ) )
File
"/home/tanjun/galaxy/galaxy-galaxy-dist-36ad8aa7b922/eggs/Cheetah-2.2.2-py2.7-linux-x86_64-ucs4.egg/Cheetah/Template.py",
line 1004, in __str__
return getattr(self, mainMethName)()
File "cheetah_DynamicallyCompiledCheetahTemplate_1356767666_06_36079.py",
line 149, in respond
KeyError: 'thype'
127.0.0.1 - - [29/Dec/2012:15:54:27 +0800] "GET /api/histories/f597429621d6eb2b
HTTP/1.1" 200 - "http://localhost:8080/history"; "Mozilla/5.0 (X11; Linux
x86_64) AppleWebKit/535.19 (KHTML, like Gecko) Ubuntu/11.10
Chromium/18.0.1025.168 Chrome/18.0.1025.168 Safari/535.19"
127.0.0.1 - - [29/Dec/2012:15:54:27 +0800] "GET
/api/histories/f597429621d6eb2b/contents?ids=ebfb8f50c6abde6d HTTP/1.1" 200 -
"http://localhost:8080/history"; "Mozilla/5.0 (X11; Linux x86_64)
AppleWebKit/535.19 (KHTML, like Gecko) Ubuntu/11.10 Chromium/18.0.1025.168
Chrome/18.0.1025.168 Safari/535.19"
Could anybody help me?
Thanks!
===================================================
Regards!
School of Computer Engineering and Science Shanghai University, Shanghai China
Tan Jun
谭军___________________________________________________________
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