[galaxy-dev] macs error

2014-03-13 Thread changyu
? Thanks a lot. Changyu Traceback (most recent call last): File /ifs/rcgroups/webapps/galaxy/rcapps/rcapps-galaxy-dist03/lib/galaxy/jobs/runners/__init__.py, line 152, in prepare_job job_wrapper.prepare() File /ifs/rcgroups/webapps/galaxy/rcapps/rcapps-galaxy-dist03/lib/galaxy/jobs

[galaxy-dev] http://toolshed.g2.bx.psu.edu/ is down?

2014-03-17 Thread changyu
Is http://toolshed.g2.bx.psu.edu/ down? ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To

[galaxy-dev] reference genome

2014-03-03 Thread Changyu Fan
. And Galaxy server was restarted each time we changed .loc file. However, There is still no reference is available through the NGS: mapping Bowtie2. How should we debug this? We could not find any errors. Is there any log file we should look into? Anything we missed here? Thanks a lot. Changyu