Re: [galaxy-dev] Error uploading files through filesystem paths: MacOS, Postgres and galaxy-central

2011-08-23 Thread Nate Coraor
Camille Stephan wrote:
> Hello,
> 
> I just installed postgres in my machine and things seem to work fine except
> for the "Upload files from filesystems paths" option which gives the
> following error:
> 
> "Invalid paths:
> /path/to/file.fasta
> "
> 
> The path is correct and I tried with different files and file formats. I
> have the most recent version from galaxy-central.
> 
> Any idea what could be causing this?

Hi Camille,

Does the user running Galaxy have filesystem access to those files?

--nate

> 
> Thanks!
> Camille
> 
> -- 
> ***
> Camille Stephan-Otto Attolini, PhD
> Senior Research Officer, Bioinformatics and Biostatistics unit
> IRB Barcelona
> Tel (+34) 93 402 0553

> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> 
>   http://lists.bx.psu.edu/

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/


[galaxy-dev] Error uploading files through filesystem paths: MacOS, Postgres and galaxy-central

2011-08-10 Thread Camille Stephan
Hello,

I just installed postgres in my machine and things seem to work fine except
for the "Upload files from filesystems paths" option which gives the
following error:

"Invalid paths:
/path/to/file.fasta
"

The path is correct and I tried with different files and file formats. I
have the most recent version from galaxy-central.

Any idea what could be causing this?

Thanks!
Camille

-- 
***
Camille Stephan-Otto Attolini, PhD
Senior Research Officer, Bioinformatics and Biostatistics unit
IRB Barcelona
Tel (+34) 93 402 0553
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/