Any more thought on how to accomplish this without my current hack? Ideally it
would be great if this feature could become part of galaxy-central. This is a
feature that we would really like to implement so that our reports can link to
the output files.
Thanks,
Ilya
-Original
Ilya, you can use trans.request.host to get the base url.
On Oct 20, 2011, at 11:52 AM, Chorny, Ilya wrote:
I thought I would add this to the list in case anyone in the galaxy :) knew
the answer. I get a mapping error every time I invoke url_for. What variable
stores the base url for the
I need the base_url and the proxy. That is why I am using cookie_path. Any
thoughts on how to get both.
Thanks,
Ilya
-Original Message-
From: Greg Von Kuster [mailto:g...@bx.psu.edu]
Sent: Friday, October 21, 2011 6:11 AM
To: Chorny, Ilya
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re:
Also, I do not have access to trans in the Tools class in
lib/galaxy/tools/__init__.py.
Thanks,
Ilya
-Original Message-
From: galaxy-dev-boun...@lists.bx.psu.edu
[mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Chorny, Ilya
Sent: Friday, October 21, 2011 8:40 AM
To: Greg Von
Ilya,
Tools are not tightly coupled to the Galaxy web framework ( they can be
executed on the command line outside of Galaxy ) so, as you've commented, you
don't have access to the web framework from there. It's unclear to me what you
are trying to do. Can you clarify a bit more?
Greg Von
Excerpts from Chorny, Ilya's message of 2011-10-21 01:51:03 +:
I get the following error from routes
AttributeError: 'thread._local' object has no attribute 'mapper'
Okay, what I suspected. This is a product of the fact that job running
is decoupled from the web frontend. The job runner
Excerpts from Chorny, Ilya's message of 2011-10-21 15:43:35 +:
Also, I do not have access to trans in the Tools class in
lib/galaxy/tools/__init__.py.
'trans' is the state of a web transaction (a single request response
cycle). It is this only accessible for code that occurs within that
I thought I would add this to the list in case anyone in the galaxy :) knew the
answer. I get a mapping error every time I invoke url_for. What variable
stores the base url for the galaxy instance?
Thanks,
Ilya
-Original Message-
From: Chorny, Ilya
Sent: Wednesday, October 19, 2011
Excerpts from Chorny, Ilya's message of 2011-10-20 15:52:03 +:
I thought I would add this to the list in case anyone in the galaxy :)
knew the answer. I get a mapping error every time I invoke url_for.
What variable stores the base url for the galaxy instance?
Can you provide the specific
I get the following error from routes
AttributeError: 'thread._local' object has no attribute 'mapper'
-Original Message-
From: James Taylor [mailto:ja...@jamestaylor.org]
Sent: Thursday, October 20, 2011 5:46 PM
To: Chorny, Ilya
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev]
10 matches
Mail list logo
