It looks like you have tools with no matching id in toolbox.tools_by_id.
Given the complexity of your job_conf.xml I assume you are using
multiple Galaxy processes? Have you installed stuff from the tool shed
or migrated tools and not restarted all Galaxy processes, or did you
try to restart
Hi,
anyone has seen the following bug in Galaxy November release?
galaxy.jobs.handler ERROR 2013-11-15 00:07:41,008 Failed to generate job
destination
Traceback (most recent call last):
File /usr/local/galaxy/galaxy-dist/lib/galaxy/jobs/handler.py, line
311, in __check_if_ready_to_run
Hey Bjoern,
Can you post your job_conf.xml or send it to galaxy-b...@bx.psu.edu
if it has something sensitive in it, alternatively your runner urls if
you are still using the older format for specifying these things? Is
this for every job or just certain tools?
-John
On Thu, Nov 14, 2013 at
Hi John,
please find attached my jobs_conf.xml file. I was not able to find any
systematic in that error. It seems to happen not so often.
Thanks,
Bjoern
Hey Bjoern,
Can you post your job_conf.xml or send it to galaxy-b...@bx.psu.edu
if it has something sensitive in it, alternatively
