The filter on the tophat2 fusions output wasn't being evaluated correctly when
settingsType is preSet since the param dict wouldn't then have an entry for
'fusion_search'
$ hg diff tools/ngs_rna/tophat2_wrapper.xml
diff -r 3f12146d6d81 tools/ngs_rna/tophat2_wrapper.xml
---
Fixed in -central changeset 05a172868303
Thanks,
J.
On Sep 18, 2012, at 4:57 PM, Jim Johnson wrote:
The filter on the tophat2 fusions output wasn't being evaluated correctly
when settingsType is preSet since the param dict wouldn't then have an entry
for 'fusion_search'
$ hg diff
