Hello: I am trying to configure Galaxy to submit jobs to a remote cluster (specifically, an XSEDE resource to which I don't have administrative access). I'm familiar with LWR and have read another response about configuring the Galaxy host as a PBS submit host. What is the best approach to accomplish what I'm after?
I have experimented with the cli job runner with the SecureShell and Torque plugins. With some minimal modifications, I can run jobs via this mechanism, but file staging fails. I haven't looked into the details of the staging failure yet. Is this a viable approach? Is the cli job runner supported? (the universe_wsgi.ini file says available job runners include pbs and drmaa) I've found a similar question on the galaxy-dev mailing list, with mention of some relevant recent work: http://dev.list.galaxyproject.org/Remote-Job-Submission-from-Local-Install-td4655144.html What is the status of the work referenced in that post? Thanks, Tom Uram
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
