[galaxy-dev] Help with Galaxy server migration

2014-10-16 Thread Sarah Diehl
Dear all, I'm trying to migrate our local Galaxy server from a standalone server running on CentOS 5 to a setup that runs Galaxy in a Docker container (bgruening/galaxy-stable). Due to Docker and the setup of the container, almost all data, tools, configs etc. have to move to a different

Re: [galaxy-dev] Help with Galaxy server migration

2014-10-16 Thread John Chilton
Hmm hopefully someone more knowledgeable about the tool shed than me responds also but I had a couple quick thoughts. The first is a warning - workflows may break. At very least workflows that depend on the previous instance having gone through tool migrations instead of tool install. My

Re: [galaxy-dev] Help with Galaxy server migration

2014-10-16 Thread Sarah Diehl
@lists.bx.psu.edu List galaxy-dev@lists.bx.psu.edu Sent: Thursday, October 16, 2014 3:17:39 PM Subject: Re: [galaxy-dev] Help with Galaxy server migration Hmm hopefully someone more knowledgeable about the tool shed than me responds also but I had a couple quick thoughts. The first is a warning