Re: [galaxy-dev] LAJ Error

2011-07-13 Thread Dannon Baker
Jason, The LAJ tool is something we deprecated and removed from production a while back, recommending MAF over AXT. Something you might be able to try would be converting your AXT file to MAF and then use GMAJ for visualization. Thanks! -Dannon On May 17, 2011, at 8:32 PM, Ellul Jason wrote

Re: [galaxy-dev] LAJ Error

2011-05-17 Thread Ellul Jason
Hi All, I have been able to workaround the problem I was having by modifying the LAJ_code.py to include 'and data != None' on each of the elif statements. i.e. if name == "maf_input": params["alignfile1"] = "display?id=%s" % data.id elif name == "seq_file1" and data !

[galaxy-dev] LAJ Error

2011-05-03 Thread Ellul Jason
Hi All, I am attempting to do a local install of Galaxy using the galaxy-dist source. While testing some of the the tools I have run into a problem with the laj Pairwise Alignment Viewer tool. I have also tested this on the test server http://test.g2.bx.psu.edu/ and I am getting a very similar