Re: [galaxy-dev] Pre pull-request: CLI and hidden data

2014-06-04 Thread John Chilton
Hey Carrie, Thanks for starting this conversation. We talked a while yesterday on IRC, but I wanted to summarize our conversation and give everyone an update. I am not saying no and certainly not saying no to all of it, but I would be very hesitant to include the job staging / rewriting stuff

[galaxy-dev] Pre pull-request: CLI and hidden data

2014-06-03 Thread Ganote, Carrie L
Hi Devs, I'd like to open up some discussion about incorporating some code bits into the Galaxy distribution. My code is here: https://bitbucket.org/cganote/osg-blast-galaxy First off, I'd like to say that these changes were made initially as hacks to get Galaxy working with a grid interface f