David Hoover wrote:
> We've run into an error with the SAM to BAM converter.
>
> An error occurred running this job: Samtools Version: 0.1.15 (r949:203)
> Error extracting alignments from
> (/gs1/users/galaxy/pro/database/files/000/dataset_285.dat), requested number
> of bytes is more than a Python string can hold
>
> We are running 32-bit Python. Would this be the problem, or do we need a
> newer version of samtools?
Hey David,
64 bit would probably fix it since with it you get a much larger python
string. But this should have been fixed in 3581:c07a6bdc794c, are you
running an older version?
--nate
>
> David Hoover
> Helix Systems Staff
> http://helix.nih.gov
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