Thanks Jen! That makes more sense to me.
Can you explain more about the 'custom reference genome'?
Do you just mean uploading the reference genome in the normal fashion,
(FTP or web form) and then it's available to the NGS tools?
-Greg
On Wed, Dec 19, 2012 at 12:46 PM, Jennifer Jackson wrote
Hi Greg,
At the very top of this wiki:
http://wiki.galaxyproject.org/Admin/NGS%20Local%20Setup
is a link to a related wiki:
http://wiki.galaxyproject.org/Admin/Data%20Integration
that has additional required set-up info. This page also includes
information about how to rsync the indexes curre
Hi guys,
I'm still stuck on these questions. Even if you could just point me
in the right direction to learn more on my own, I'd greatly appreciate
it.
Thanks,
Greg
On Tue, Dec 18, 2012 at 12:40 PM, greg wrote:
> Hi all,
>
> I'm finishing up installing Galaxy on our local cluster.
>
> I'm at
Hi all,
I'm finishing up installing Galaxy on our local cluster.
I'm at this step regarding setting up reference genomes:
http://wiki.galaxyproject.org/Admin/NGS%20Local%20Setup#Setting_Up_the_Reference_Genomes_for_NGS_Tools
But it looks like a whole lot of manual work that needs to be done by
a
