[galaxy-dev] Strange Could not moveŠ. error

2012-08-02 Thread Iry Witham
Hi Dev-Team, I am experiencing a strange error that I cannot replicate on two identical instances of my Galaxy server. I have a tool that runs fine on my test instance and fails on my development instance. The servers are identically configured and running the same build. The handler.log

Re: [galaxy-dev] Strange Could not moveŠ. error

2012-08-02 Thread Jeremy Goecks
Iry, This is probably an issue with using the from_work_dir attribute. Prior to changeset 524cfb8ca67d, the attribute didn't work when set_metadata_externally was True; 524cfb8ca67d modified the attribute implementation so that it works regardless of how metadata is set. This changeset is

Re: [galaxy-dev] Strange Could not moveŠ. error

2012-08-02 Thread Iry Witham
-dev] Strange Could not moveŠ. error Hi Iry- A call to shutil.move is failing, and this could be because file-copying semantics are different on your test instance's OS and/or filesystem than they are on your development instance's OS and/or filesystem. What OS and file system are you using

Re: [galaxy-dev] Strange Could not moveŠ. error

2012-08-02 Thread Scott McManus
Ok - that makes sense. So the from_work_dir attribute is part of the tool's data element under outputs, and Jeremy fixed a timing issue. Thanks, Jeremy! -Scott - Original Message - Iry, This is probably an issue with using the from_work_dir attribute. Prior to changeset