Can you set a more specific datatype? This is a hack from a heavy
Galaxy user and developer:
What I and others are doing is hacking the library file path uploads
functionality. If you upload by file path, select your compressed
fastq files, and set data type to fastqsanger (*this is the key
Just an update: when I set it to copy, it works fine as expected.
So I guess the only alternatives alternatives I have are:
- link the file, but as unzipped fastq
- copy the file (which copies the unzipped data to galaxy)
Would be nice to have a way of working with gzipped fastq files, since
Hello,
I have been using the galaxy API to upload files into a library (using a
local folder for library import) and running a workflow into a history. I
have been following the example scripts that come with galaxy.
When I upload a gzipped fastq file, in autodetection mode (linking the
file and
