Top and qstat are generic unix utilities for tracking jobs. Running 'man
' will, assuming they are installed on your system, provide the best
information for using them.
J.
On Dec 29, 2011, at 12:09 PM, Bassam Tork wrote:
> Dear Jeremy,
> Thank You very much, I will try your suggestion. Could
Dear Jeremy,
Thank You very much, I will try your suggestion. Could you please guide me
to the link/webpage that talks about checking the job manually using
top/qstat/similar.
Happy New Year,
Bassam Tork.
On Thu, Dec 29, 2011 at 9:18 AM, Jeremy Goecks wrote:
> My idea was to pass all above includ
> My idea was to pass all above including main.bash as parameters to the
> python wrapper (called run.py, attached), as follows:
>
> where the last parameter sys.argv[7] is the output file, specified by xml
> file.
This is the correct approach.
> But galaxy was running for more than 3 hours, al
*Hello,*
I am interested in defining vispa tool on galaxy
*(http://alla.cs.gsu.edu/~software/VISPA/vispa.html).*
*we usually run vispa using main.bash file as follows
./main.bash readFile referenceFile threads n t
where:
threads: number of threads
n:number of mismatches
t:mutation rate
the
