Hi Angelica,
It appears that you are attempting to directly name the output files.
Instead, use a variable naming method that permits Galaxy to actually
name the files accessed by the database, using with tags
to link any working files (with "from_work_dir") and attach attributes
(including
I have made a wrapper that has a tool that giving it an input file, gives
you two output files with known extension: .gem and .log
I call the tool with a python file, and I pass it the input file and the
two output file names for galaxy to show them, but when I look into de
database/files/000/ i g