Re: [galaxy-dev] manage toolshed repos crashing

2013-08-26 Thread Greg Von Kuster
Hello Robert,

Is this still a problem?  If so, what version of Galaxy are you running?

Greg Von Kuster


On Aug 23, 2013, at 1:47 PM, Robert Baertsch  wrote:

> When I click on manage installed tool shed repos on the admin screen, I get 
> this error.
> 
> Any ideas how to debug?
> -Robert
> ⇝ UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: 
> ordinal not in range(128)
> URL: http://su2c-dev.ucsc.edu/admin_toolshed/browse_repositories
> Module weberror.evalexception.middleware:364 in respond  view
> >>  app_iter = self.application(environ, detect_start_response)
> Module paste.recursive:84 in __call__  view
> >>  return self.application(environ, start_response)
> Module paste.httpexceptions:633 in __call__  view
> >>  return self.application(environ, start_response)
> Module galaxy.web.framework.base:132 in __call__  view
> >>  return self.handle_request( environ, start_response )
> Module galaxy.web.framework.base:190 in handle_request  view
> >>  body = method( trans, **kwargs )
> Module galaxy.web.framework:221 in decorator  view
> >>  return func( self, trans, *args, **kwargs )
> Module galaxy.webapps.galaxy.controllers.admin_toolshed:151 in 
> browse_repositories  view
> >>  return self.installed_repository_grid( trans, **kwd )
> Module galaxy.web.framework.helpers.grids:290 in __call__  view
> >>  kwargs=kwargs )
> Module galaxy.web.framework:991 in fill_template  view
> >>  return self.fill_template_mako( filename, **kwargs )
> Module galaxy.web.framework:1006 in fill_template_mako  view
> >>  return template.render( **data )
> Module mako.template:296 in render  view
> >>  return runtime._render(self, self.callable_, args, data)
> Module mako.runtime:660 in _render  view
> >>  **_kwargs_for_callable(callable_, data))
> Module mako.runtime:692 in _render_context  view
> >>  _exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
> Module mako.runtime:718 in _exec_template  view
> >>  callable_(context, *args, **kwargs)
> Module _base_mako:42 in render_body  view
> >>  __M_writer(unicode(next.body()))
> Module _grid_base_mako:127 in render_body  view
> >>  __M_writer(unicode(self.grid_body( grid )))
> Module _grid_base_mako:747 in render_grid_body  view
> >>  __M_writer(unicode(self.make_grid( grid )))
> Module _grid_base_mako:777 in render_make_grid  view
> >>  __M_writer(unicode(self.render_grid_table( grid, show_item_checkboxes )))
> Module _grid_base_mako:724 in render_render_grid_table  view
> >>  __M_writer(unicode(render_grid_table_body_contents( grid, 
> >> show_item_checkboxes )))
> Module _grid_base_mako:627 in render_grid_table_body_contents  view
> >>  return 
> >> render_render_grid_table_body_contents(context,grid,show_item_checkboxes)
> Module _grid_base_mako:335 in render_render_grid_table_body_contents  
> view
> >>  value = column.get_value( trans, grid, item )
> Module tool_shed.galaxy_install.grids.admin_toolshed_grids:61 in get_value
>   view
> >>  elif tool_shed_repository.missing_tool_dependencies:
> Module galaxy.model:3621 in missing_tool_dependencies  view
> >>  for tool_dependency in self.tool_dependencies:
> Module sqlalchemy.orm.attributes:168 in __get__  view
> Module sqlalchemy.orm.attributes:453 in get  view
> Module sqlalchemy.orm.strategies:508 in _load_for_state  view
> Module sqlalchemy.orm.strategies:574 in _emit_lazyload  view
> Module sqlalchemy.orm.query:2115 in all  view
> Module sqlalchemy.orm.query:2341 in instances  view
> Module sqlalchemy.engine.base:3204 in fetchall  view
> Module sqlalchemy.engine.base:3350 in _fetchall_impl  view
> UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: 
> ordinal not in range(128)
> 
> ___
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> 
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[galaxy-dev] manage toolshed repos crashing

2013-08-23 Thread Robert Baertsch
When I click on manage installed tool shed repos on the admin screen, I get 
this error.

Any ideas how to debug?
-Robert
⇝ UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: 
ordinal not in range(128)
URL: http://su2c-dev.ucsc.edu/admin_toolshed/browse_repositories
Module weberror.evalexception.middleware:364 in respond  view
>>  app_iter = self.application(environ, detect_start_response)
Module paste.recursive:84 in __call__  view
>>  return self.application(environ, start_response)
Module paste.httpexceptions:633 in __call__  view
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:132 in __call__  view
>>  return self.handle_request( environ, start_response )
Module galaxy.web.framework.base:190 in handle_request  view
>>  body = method( trans, **kwargs )
Module galaxy.web.framework:221 in decorator  view
>>  return func( self, trans, *args, **kwargs )
Module galaxy.webapps.galaxy.controllers.admin_toolshed:151 in 
browse_repositories  view
>>  return self.installed_repository_grid( trans, **kwd )
Module galaxy.web.framework.helpers.grids:290 in __call__  view
>>  kwargs=kwargs )
Module galaxy.web.framework:991 in fill_template  view
>>  return self.fill_template_mako( filename, **kwargs )
Module galaxy.web.framework:1006 in fill_template_mako  view
>>  return template.render( **data )
Module mako.template:296 in render  view
>>  return runtime._render(self, self.callable_, args, data)
Module mako.runtime:660 in _render  view
>>  **_kwargs_for_callable(callable_, data))
Module mako.runtime:692 in _render_context  view
>>  _exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
Module mako.runtime:718 in _exec_template  view
>>  callable_(context, *args, **kwargs)
Module _base_mako:42 in render_body  view
>>  __M_writer(unicode(next.body()))
Module _grid_base_mako:127 in render_body  view
>>  __M_writer(unicode(self.grid_body( grid )))
Module _grid_base_mako:747 in render_grid_body  view
>>  __M_writer(unicode(self.make_grid( grid )))
Module _grid_base_mako:777 in render_make_grid  view
>>  __M_writer(unicode(self.render_grid_table( grid, show_item_checkboxes )))
Module _grid_base_mako:724 in render_render_grid_table  view
>>  __M_writer(unicode(render_grid_table_body_contents( grid, 
>> show_item_checkboxes )))
Module _grid_base_mako:627 in render_grid_table_body_contents  view
>>  return 
>> render_render_grid_table_body_contents(context,grid,show_item_checkboxes)
Module _grid_base_mako:335 in render_render_grid_table_body_contents  
view
>>  value = column.get_value( trans, grid, item )
Module tool_shed.galaxy_install.grids.admin_toolshed_grids:61 in get_value  
view
>>  elif tool_shed_repository.missing_tool_dependencies:
Module galaxy.model:3621 in missing_tool_dependencies  view
>>  for tool_dependency in self.tool_dependencies:
Module sqlalchemy.orm.attributes:168 in __get__  view
Module sqlalchemy.orm.attributes:453 in get  view
Module sqlalchemy.orm.strategies:508 in _load_for_state  view
Module sqlalchemy.orm.strategies:574 in _emit_lazyload  view
Module sqlalchemy.orm.query:2115 in all  view
Module sqlalchemy.orm.query:2341 in instances  view
Module sqlalchemy.engine.base:3204 in fetchall  view
Module sqlalchemy.engine.base:3350 in _fetchall_impl  view
UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: 
ordinal not in range(128)

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/