Hello,
I've set up galaxy at the local linux. After data configuration, I run fastqc
to check how it runs. Here I got error message as below --
error
An error occurred running this job: Traceback (most recent call last): File
"../galaxy-dist/tools/rgenetics/rgFastQC.py", line 158, in assert
os.path.isfile(opts.executable),'##rgFastQC.py error - cannot find executable
%s' % opts.executable AssertionError: ##r
Here is the detail of the error --
Tool: FastQC:Read QC
Name: FastQC_FASTQ Groomer on data 6.html
Created: May 02, 2013
Filesize: 0 bytes
Dbkey: mm9
Format: html
Tool Version:
Tool Standard Output: stdout
Tool Standard Error: stderr
Tool Exit Code: 1
Input Parameter Value
Short read data from your current history 8: FASTQ Groomer on data 6
Title for the output file - to remind you what the job was for FastQC
Contaminant list No dataset
What's the problem? Thank you!
Kathryn
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