Re: [galaxy-dev] samtools in local instance of galaxy

2012-01-31 Thread Nate Coraor
On Jan 31, 2012, at 5:29 AM, Praveen Baskaran wrote: Nate, Thanks, I have already changed that in unververse_wsgi.ini, but the problem continues. When I checked the galaxy.log file after executing samtools, got the following error: galaxy.jobs.runners.drmaa DEBUG 2012-01-28

Re: [galaxy-dev] samtools in local instance of galaxy

2012-01-30 Thread Nate Coraor
On Jan 25, 2012, at 5:28 AM, Praveen Baskaran wrote: i have installed local instance of galaxy and have a small problem with samtools. when i try to convert sam file to bam, the result pane shows that the job is running (for several hours). but when check the galaxy log file, it shows that

[galaxy-dev] samtools in local instance of galaxy

2012-01-25 Thread Praveen Baskaran
i have installed local instance of galaxy and have a small problem with samtools. when i try to convert sam file to bam, the result pane shows that the job is running (for several hours). but when check the galaxy log file, it shows that the job is finished normally. i can also find the result