Re: [galaxy-dev] tools installed from a toolshed repository displayed in an arbitrary order

2013-09-16 Thread Björn Grüning
Hi Yulia, that is currently not supported. I think there is somewhere a trello card about that problem. One idea was to give each repository a hint where to install the tools (maybe be a small tool_conf.xml). Maybe you have a better idea? Currently you can try to manipulate the

Re: [galaxy-dev] tools installed from a toolshed repository displayed in an arbitrary order

2013-09-16 Thread Ido Tamir
IIRC then you can change the order of tools manually by copying around the individual tools in shed_tool_conf.xml In my case it builds the integrated_tool_panel.xml in reverse order within the section. I still have labels between the section defined in the tool_conf.xml. But no subsections.

[galaxy-dev] tools installed from a toolshed repository displayed in an arbitrary order

2013-09-15 Thread Yulia.Arzhaeva
Hello guys, After porting our Galaxy tools into a tool shed repository the tool sections got lost. I know there is a possibility to assign a repository to a section inside the tools panel when the repository is getting installed. However, we would still like to have sections inside the