Re: [galaxy-dev] upload large data file
Yanji Xu wrote: > Dear Sir/Madam, > > I installed galaxy in my local server, then I tried to upload a 4.7 Gb fastq > file into galaxy, but failed. Below is the error message. > > OverflowError: signed integer is greater than maximum > > How could I upload large data files into galaxy and process the data? Hi Dicty, Is there any more output prior to this error message? It'd tell us exactly what code is failing. --nate > > Any information from you would be quite appreciated. > > Thanks, > > Dicty > ___ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] upload large data file
On Fri, Mar 04, 2011 at 04:28:20PM +, Yanji Xu wrote: > Dear Sir/Madam, > > I installed galaxy in my local server, then I tried to upload a 4.7 Gb > fastq file into galaxy, but failed. Below is the error message. > > OverflowError: signed integer is greater than maximum > > How could I upload large data files into galaxy and process the data? Use either the Upload from filepath mechanism available for data libraries ( https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFiles) which has you copy the file to the server in advance and then import it, or setup the Upload via FTP functionality ( https://bitbucket.org/galaxy/galaxy-central/wiki/UploadViaFTP ). -- Ry4an Brase 612-626-6575 Software Developer Application Development University of Minnesota Supercomputing Institutehttp://www.msi.umn.edu ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] upload large data file
Dear Sir/Madam, I installed galaxy in my local server, then I tried to upload a 4.7 Gb fastq file into galaxy, but failed. Below is the error message. OverflowError: signed integer is greater than maximum How could I upload large data files into galaxy and process the data? Any information from you would be quite appreciated. Thanks, Dicty ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
