Hi Arshad, do you have samtools installed? Galaxy will build an BAM index file automatically during upload, but only if you have samtools installed.
Cheers, Bjoern > I am trying to upload a bam file for my data analysis (size is about > 9GB) I am trying URL method to up load and getting error message, can > you please help me to sort out this problem. I am seeing following > message > > "An error occurred setting the metadata for this dataset. You may be > able to set it manually or retry auto-detection" > > > Thanks > *********** > Arshad > > -- > Muhammad Arshad Rafiq, PhD > Research Associate > Laboratory of Dr. R. Hamilton > Physiology and Experimental Medicine > Research Institute > The Hospital for Sick Children > McMaster Building, Room 7005 > 88 Elm St. > Toronto, ON > M5G 1X8 > Canada > 647-237-4915 > arshadrafi...@gmail.com > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
