Hi Aaron, On 07/06/2011 04:45 PM, Zschunke, Aaron M. wrote:
> Is there any way to convert a certain section of a bam file to fastq > using the galaxy tools? I just want to convert a certain part of the > genome. Thanks. there is the bam_to_fastq tool on the toolshed (http://toolshed.g2.bx.psu.edu/) in the SAM subsection. Regards, Holger -- Dr. Holger Klein Core Facility Bioinformatics Institute of Molecular Biology gGmbH (IMB) http://www.imb-mainz.de/ Tel: +49(6131) 39 21511 ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
