Re: [galaxy-dev] Blast database permissions

2011-10-19 Thread Fields, Christopher J
On Oct 19, 2011, at 8:03 AM, Peter Cock wrote:

> On Wed, Oct 19, 2011 at 1:41 PM, Fields, Christopher J
>  wrote:
>> On Oct 19, 2011, at 4:33 AM, Peter Cock wrote:
>> 
>>> On Wed, Oct 19, 2011 at 10:24 AM, Jeroen Crappé  
>>> wrote:
 Dear all,
 
 I have recently installed a local galaxy on our servers.
 I could succesfully add a blastable database via the blastdb.loc file.
 All is working, so no problems regarding that.
 My question however is, how can I set user permissions on the use of these 
 blast databases, or is this not possible?
 For the moment it looks as though every user, no matter what its 
 permisions are, can use and see the database, which is not what I want 
 because different groups will be using this galaxy instance.
 
 Could somebody help me out on this issue?
 
 kind regards,
 
 Crappé Jeroen
>>> 
>>> That is not currently possible, although this might be
>>> extended beyond just BLAST databases to anything
>>> accessed via a *.loc file.
>>> 
>>> I guess an extra column could reference a role in
>>> the Galaxy permissions or something...
>>> 
>>> Peter
>> 
>> Isn't this what the sharing interface is supposed to be for
>> (sharing certain files among one or more users/groups)?
>> 
>> chris
> 
> Exactly, but the loc files don't hook into this (yet).
> 
> Peter

Ack, that's a nigh big hole, cap'n!

(spoken in a bad impression of Scotty, leaving out obvious 'dilithium crystal' 
pandering)

chris
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/


Re: [galaxy-dev] Blast database permissions

2011-10-19 Thread Peter Cock
On Wed, Oct 19, 2011 at 1:41 PM, Fields, Christopher J
 wrote:
> On Oct 19, 2011, at 4:33 AM, Peter Cock wrote:
>
>> On Wed, Oct 19, 2011 at 10:24 AM, Jeroen Crappé  
>> wrote:
>>> Dear all,
>>>
>>> I have recently installed a local galaxy on our servers.
>>> I could succesfully add a blastable database via the blastdb.loc file.
>>> All is working, so no problems regarding that.
>>> My question however is, how can I set user permissions on the use of these 
>>> blast databases, or is this not possible?
>>> For the moment it looks as though every user, no matter what its permisions 
>>> are, can use and see the database, which is not what I want because 
>>> different groups will be using this galaxy instance.
>>>
>>> Could somebody help me out on this issue?
>>>
>>> kind regards,
>>>
>>> Crappé Jeroen
>>
>> That is not currently possible, although this might be
>> extended beyond just BLAST databases to anything
>> accessed via a *.loc file.
>>
>> I guess an extra column could reference a role in
>> the Galaxy permissions or something...
>>
>> Peter
>
> Isn't this what the sharing interface is supposed to be for
> (sharing certain files among one or more users/groups)?
>
> chris

Exactly, but the loc files don't hook into this (yet).

Peter

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/


Re: [galaxy-dev] Blast database permissions

2011-10-19 Thread Fields, Christopher J
On Oct 19, 2011, at 4:33 AM, Peter Cock wrote:

> On Wed, Oct 19, 2011 at 10:24 AM, Jeroen Crappé  
> wrote:
>> Dear all,
>> 
>> I have recently installed a local galaxy on our servers.
>> I could succesfully add a blastable database via the blastdb.loc file.
>> All is working, so no problems regarding that.
>> My question however is, how can I set user permissions on the use of these 
>> blast databases, or is this not possible?
>> For the moment it looks as though every user, no matter what its permisions 
>> are, can use and see the database, which is not what I want because 
>> different groups will be using this galaxy instance.
>> 
>> Could somebody help me out on this issue?
>> 
>> kind regards,
>> 
>> Crappé Jeroen
> 
> That is not currently possible, although this might be
> extended beyond just BLAST databases to anything
> accessed via a *.loc file.
> 
> I guess an extra column could reference a role in
> the Galaxy permissions or something...
> 
> Peter

Isn't this what the sharing interface is supposed to be for (sharing certain 
files among one or more users/groups)?

chris
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/


Re: [galaxy-dev] Blast database permissions

2011-10-19 Thread Peter Cock
On Wed, Oct 19, 2011 at 10:24 AM, Jeroen Crappé  wrote:
> Dear all,
>
> I have recently installed a local galaxy on our servers.
> I could succesfully add a blastable database via the blastdb.loc file.
> All is working, so no problems regarding that.
> My question however is, how can I set user permissions on the use of these 
> blast databases, or is this not possible?
> For the moment it looks as though every user, no matter what its permisions 
> are, can use and see the database, which is not what I want because different 
> groups will be using this galaxy instance.
>
> Could somebody help me out on this issue?
>
> kind regards,
>
> Crappé Jeroen

That is not currently possible, although this might be
extended beyond just BLAST databases to anything
accessed via a *.loc file.

I guess an extra column could reference a role in
the Galaxy permissions or something...

Peter

___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/