Re: [galaxy-dev] Changing job command line.

2013-02-19 Thread Nate Coraor
On Feb 14, 2013, at 7:26 AM, James wrote: Hi Nate, Thanks for your reply, I guess the idea is that the job is prepared in the interface which lets a user select the grid. This is currently located in my galaxy instance as a if statement in the default job dispatcher. Just before it

Re: [galaxy-dev] Changing job command line.

2013-02-14 Thread James
Hi Nate, Thanks for your reply, I guess the idea is that the job is prepared in the interface which lets a user select the grid. This is currently located in my galaxy instance as a if statement in the default job dispatcher. Just before it sends it to the job runner and all the preparation

Re: [galaxy-dev] Changing job command line.

2013-02-13 Thread Nate Coraor
On Feb 4, 2013, at 6:03 PM, James Boocock wrote: Hi All, I am currently working on a clustering interface for galaxy that will hopefully enable users to pick the grid in the tool form. With tools that need access to files within the galaxy directory, I have an idea to create a symlinked