Re: [galaxy-dev] Error executing tophat2

2013-02-13 Thread Sachit Adhikari
Thanks, that's what I was missing. On Wed, Feb 13, 2013 at 7:09 PM, Jeremy Goecks wrote: > Error in tophat: > > [2013-02-13 02:02:43] Beginning TopHat run (v2.0.7) > --- > [2013-02-13 02:02:43] Checking for Bowtie > Bowtie version:

Re: [galaxy-dev] Error executing tophat2

2013-02-13 Thread Jeremy Goecks
> Error in tophat: > > [2013-02-13 02:02:43] Beginning TopHat run (v2.0.7) > --- > [2013-02-13 02:02:43] Checking for Bowtie > Bowtie version:2.0.6.0 > [2013-02-13 02:02:43] Checking for Samtools > Samtools version: