On Aug 8, 2013, at 9:48 AM, Auerbach, Kenneth R. wrote:
> Hello,
>
> Could anyone tell me if there are detailed instructions anywhere for setting
> up Galaxy on a Linux cluster using an LSF scheduler?
>
> Thank you.
Hi,
There aren't any instructions specific to LSF because we simply interface with
it using the DRMAA runner, like we do for PBS Pro and Grid Engine. You do need
to install FedStage DRMAA for LSF since Platform doesn't (didn't?) ship a DRMAA
library with LSF:
http://sourceforge.net/projects/lsf-drmaa/
>From there, you can follow the instructions in the cluster/job documentation:
http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster
http://wiki.galaxyproject.org/Admin/Config/Jobs
General documentation on setting up a "production" Galaxy system can be found
at:
http://usegalaxy.org/production
--nate
>
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