> JBrowse is fully client-side, so there is no jbrowse server we can use. Is
> there a way to pass data to galaxy directly without the server? This
> functionality could also be useful for desktop applications.
This isn't possible right now, though you could imagine using FTP with the API
to a
I just noticed the part: "files_0|url_paste":
http://jbrowse-server.org/path/to/file.vcf";
JBrowse is fully client-side, so there is no jbrowse server we can use. Is
there a way to pass data to galaxy directly without the server? This
functionality could also be useful for desktop applications.
Do the APIs produce the proper CORS headers? Access-Control-Allow-Origin:
*, and responding to OPTIONS requests would be enough. Since this is an
API protected by a key, this doesn't have any real security implications to
just have hard-coded in.
Rob
On Oct 23, 2012 9:59 PM, "Brad Chapman" wr
> Passing it back to Jeremy, there is also a Javascript wrapper around the
> tools API which might help:
>
> https://bitbucket.org/galaxy/galaxy-central/src/tip/static/scripts/mvc/tools.js
Yes, the Galaxy team is working on a JavaScript binding to the API, and one of
the areas that we've done s
Erik and Jeremy;
>> I am a JBrowse Dev hoping to add the ability to export data directly
>> from JBrowse (JavaScript) to Galaxy
>
> The API could be used for this.
>
> Specifically, you could do an upload for the user from a URL via the
> tools API. I know that Brad Chapman (cc'd) has done this s
Erik,
The API could be used for this.
Specifically, you could do an upload for the user from a URL via the tools API.
I know that Brad Chapman (cc'd) has done this successfully recently. Brad, can
you share the parameters used to do this?
Thanks,
J.
On Oct 22, 2012, at 3:21 PM, Erik Derohania
