Re: [galaxy-dev] Number of outputs = number of inputs

2013-07-30 Thread Peter Cock
On Tue, Jul 30, 2013 at 4:29 PM, Shafer, Christina wrote: > My question is related to this post in the archive. As recommended, I > referred to > http://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Number_of_Output_datasets_cannot_be_determined_until_tool_run > for some guidance on

Re: [galaxy-dev] Number of outputs = number of inputs

2013-07-30 Thread Shafer, Christina
My question is related to this post in the archive. As recommended, I referred to http://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Number_of_Output_datasets_cannot_be_determined_until_tool_ru

Re: [galaxy-dev] Number of outputs = number of inputs

2012-10-17 Thread John Chilton
Like most days, JJ very politely pointed out that I am a wrong this morning. You can have variable numbers of outputs at runtime, see the last section ("Number of Output datasets cannot be determined until tool run" ) of this page: http://wiki.g2.bx.psu.edu/Admin/Tools/Multiple%20Output%20Files S

Re: [galaxy-dev] Number of outputs = number of inputs

2012-10-16 Thread Alex.Khassapov
lp is appreciated. Alex -Original Message- From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of John Chilton Sent: Wednesday, 17 October 2012 12:49 AM To: Sascha Kastens Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] Number of outputs = numb

Re: [galaxy-dev] Number of outputs = number of inputs

2012-10-16 Thread John Chilton
I don't believe this is possible in Galaxy right now. Are the outputs independent or is information from all inputs used to produce all outputs? If they are independent, you can create a workflow containing just your tool with 1 input and 1 output and use the batch workflow mode to run it on multip