Re: [galaxy-dev] RPy and R installation problems

2012-07-16 Thread Le-Shin Wu
Sorry, that's all I have. Le-Shin On Jul 15, 2012, at 4:41 AM, Morris Chukhman wrote: Yes! That seems to have worked! Thank you very much, Le-Shin! Are there any more of these dependencies that require these little patches to build and install properly? Morris On 7/14/2012 8:16

Re: [galaxy-dev] RPy and R installation problems

2012-07-14 Thread Le-Shin Wu
To build R, you need readline, readline_devel, and gfortran have been installed already. Then, ./configure --enable-R-shlib --prefix=/YOUR_PATH_TO_WHERE_R_WILL_BE_INSTALLED/R make make install To build rpy, you need to first, add R/lib to $LD_LIBRARY_PATH and R/bin to $PATH; sencond, comment

Re: [galaxy-dev] RPy and R installation problems

2012-07-14 Thread Le-Shin Wu
I forgot to mention the most important part. You have to modify line 100 in rpy_tools.py that is under the rpy package as version = re.search( +([0-9]+\.[0-9][0-9]+\.[0-9]+), output) Le-Shin On Jul 14, 2012, at 7:15 PM, Chukhman, Morris wrote: When I try to install rpy-1.0.3 against