Re: [galaxy-dev] Re-starting Galaxy

2012-08-28 Thread Oleksandr Moskalenko
On a related note, it's definitely nice to be able to consolidate the configuration into a single universe_wsi.ini, but --daemon and --stop-daemon are not sufficient for smooth operation of a multi web and job runner instance of Galaxy. I wonder if anyone's already adapted run.sh to restart the

Re: [galaxy-dev] Re-starting Galaxy

2012-08-28 Thread Nate Coraor
On Aug 27, 2012, at 18:13, "Sebastian Schaaf" wrote: > If you refer to using one machine as master AND host simultaneously, which > you never tried: let me tell you it does work well with SGE/OGE. I have it > running, and it just works out great. It enhances the load control on that > machine,

Re: [galaxy-dev] Re-starting Galaxy

2012-08-27 Thread Sebastian Schaaf
If you refer to using one machine as master AND host simultaneously, which you never tried: let me tell you it does work well with SGE/OGE. I have it running, and it just works out great. It enhances the load control on that machine, due to the great configuration possibilities on queue level (max.

Re: [galaxy-dev] Re-starting Galaxy

2012-08-27 Thread Langhorst, Brad
Unless something has recently changed, you will need to set up a cluster to get jobs to persist across galaxy restarts. You can do this with just a single node acting as both queue master and job runner using sun grid engine (i think, I have not tried this myself) Brad On Aug 27, 2012, at 12:51