Re: [galaxy-dev] Test Tool Shed uploads broken

2013-05-17 Thread Greg Von Kuster
Hi Peter,

Thanks for letting me know and sorry about the inconvenience.  I've fixed this 
in 9763:9c06caa86e2a which is now on the test tool shed. 

Greg Von Kuster

On May 17, 2013, at 5:08 AM, Peter Cock wrote:

 Hi Greg  Dave,
 
 I just tried to upload an update to my Blast2GO wrapper on the Test Tool Shed,
 http://testtoolshed.g2.bx.psu.edu/view/peterjc/blast2go
 
 This gave the following error, also note typo sucessfully [sic] - 
 successfully.
 
 Internal Server Error
 Galaxy was unable to sucessfully complete your request
 
 URL: 
 http://testtoolshed.g2.bx.psu.edu/upload/upload?repository_id=e4de88c47079d971
 Module galaxy.web.framework.middleware.error:149 in __call__
 app_iter = self.application(environ, sr_checker)
 Module paste.debug.prints:106 in __call__
 environ, self.app)
 Module paste.wsgilib:543 in intercept_output
 app_iter = application(environ, replacement_start_response)
 Module paste.recursive:84 in __call__
 return self.application(environ, start_response)
 Module paste.httpexceptions:633 in __call__
 return self.application(environ, start_response)
 Module galaxy.web.framework.base:132 in __call__
 return self.handle_request( environ, start_response )
 Module galaxy.web.framework.base:190 in handle_request
 body = method( trans, **kwargs )
 Module galaxy.web.framework:98 in decorator
 return func( self, trans, *args, **kwargs )
 Module galaxy.webapps.tool_shed.controllers.upload:122 in upload
 self.upload_tar( trans, repository, tar, uploaded_file, upload_point, 
 remove_repo_files_not_in_tar, commit_message, new_repo_alert )
 Module galaxy.webapps.tool_shed.controllers.upload:326 in upload_tar
 undesirable_files_removed )
 Module tool_shed.util.commit_util:116 in handle_directory_changes
 for undesirable_dir in undesirable_dirs:
 NameError: global name 'undesirable_dirs' is not defined
 
 Peter


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Re: [galaxy-dev] Test Tool Shed uploads broken

2013-05-17 Thread Peter Cock
On Fri, May 17, 2013 at 12:37 PM, Greg Von Kuster g...@bx.psu.edu wrote:
 Hi Peter,

 Thanks for letting me know and sorry about the inconvenience.  I've fixed 
 this in 9763:9c06caa86e2a which is now on the test tool shed.

 Greg Von Kuster

Great - that works for me now :)

Peter
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