Re: [galaxy-dev] Test ToolShed functional test failures

2014-04-16 Thread Peter Cock
Thanks - that was quick :)

https://bitbucket.org/galaxy/galaxy-central/commits/f3c5d9a5ed95956442dbd39e9ce97367cdc0d93b

Peter


On Wed, Apr 16, 2014 at 2:21 PM, Dave Bouvier  wrote:

> Peter,
>
> You are entirely correct, there were some changes to how histories are
> rendered, resulting in the functional test framework incorrectly detecting
> a failure. My commit 13079:f3c5d9a5ed95 should resolve this issue.
>
>   --Dave B.
>
>
> On Wed 16 Apr 2014 06:38:16 AM EDT, Peter Cock wrote:
>
>> Hi guys,
>>
>> Multiple repositories are showing failing tests, e.g.
>> http://testtoolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr
>>
>> Tests that failed
>> Tool id: blastxml_to_top_descr
>> Tool version: blastxml_to_top_descr
>> Test: test_tool_00
>> (functional.test_toolbox.TestForTool_testtoolshed.g2.
>> bx.psu.edu/repos/peterjc/blastxml_to_top_descr/
>> blastxml_to_top_descr/0.0.9)
>> Stderr:
>> Traceback:
>> Traceback (most recent call last):
>>File "/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py",
>> line 106, in test_tool
>>  self.do_it( td )
>>File "/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py",
>> line 27, in do_it
>>  test_history = galaxy_interactor.new_history()
>>File "/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/base/interactor.py",
>> line 405, in new_history
>>  self.twill_test_case.new_history()
>>File "/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/base/twilltestcase.py",
>> line 469, in new_history
>>  self.check_history_for_string('Your history is empty')
>>File "/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/base/twilltestcase.py",
>> line 310, in check_history_for_string
>>  raise AssertionError( errmsg )
>> AssertionError: no match to 'Your'
>> page content written to
>> '/var/opt/buildslaves/buildslave-ec2-2/buildbot-
>> install-test-test-tool-shed-py27/build/test/install_and_
>> test_tool_shed_repositories/repositories_with_tools/tmp/
>> tmp7xhGGg/twilltestcase-eBqu05.html'
>>
>> This looks like a framework regression...
>>
>> Peter
>> ___
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Re: [galaxy-dev] Test ToolShed functional test failures

2014-04-16 Thread Dave Bouvier

Peter,

You are entirely correct, there were some changes to how histories are 
rendered, resulting in the functional test framework incorrectly 
detecting a failure. My commit 13079:f3c5d9a5ed95 should resolve this 
issue.


  --Dave B.

On Wed 16 Apr 2014 06:38:16 AM EDT, Peter Cock wrote:

Hi guys,

Multiple repositories are showing failing tests, e.g.
http://testtoolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr

Tests that failed
Tool id: blastxml_to_top_descr
Tool version: blastxml_to_top_descr
Test: test_tool_00
(functional.test_toolbox.TestForTool_testtoolshed.g2.bx.psu.edu/repos/peterjc/blastxml_to_top_descr/blastxml_to_top_descr/0.0.9)
Stderr:
Traceback:
Traceback (most recent call last):
   File 
"/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py",
line 106, in test_tool
 self.do_it( td )
   File 
"/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/functional/test_toolbox.py",
line 27, in do_it
 test_history = galaxy_interactor.new_history()
   File 
"/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/base/interactor.py",
line 405, in new_history
 self.twill_test_case.new_history()
   File 
"/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/base/twilltestcase.py",
line 469, in new_history
 self.check_history_for_string('Your history is empty')
   File 
"/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/base/twilltestcase.py",
line 310, in check_history_for_string
 raise AssertionError( errmsg )
AssertionError: no match to 'Your'
page content written to
'/var/opt/buildslaves/buildslave-ec2-2/buildbot-install-test-test-tool-shed-py27/build/test/install_and_test_tool_shed_repositories/repositories_with_tools/tmp/tmp7xhGGg/twilltestcase-eBqu05.html'

This looks like a framework regression...

Peter
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