Re: [galaxy-dev] Tool run on cluster returns error state on clean install

2013-03-27 Thread Ganote, Carrie L
Sent: Wednesday, March 27, 2013 1:56 PM To: Ganote, Carrie L Cc: galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Tool run on cluster returns error state on clean install Hello Carrie, Ganote, Carrie L wrote, On 03/27/2013 01:22 PM: > > I am trying to upgrade our instance to the newest dist bu

Re: [galaxy-dev] Tool run on cluster returns error state on clean install

2013-03-27 Thread Assaf Gordon
Hello Carrie, Ganote, Carrie L wrote, On 03/27/2013 01:22 PM: > > I am trying to upgrade our instance to the newest dist but I get the > following in stderr when I attempt to run Bowtie or BWA: > > PREFIX/subs/galaxy_31.sh: command substitution: line 7: syntax error near > unexpected token `('