Re: [galaxy-dev] Using complete workflow in another workflow

2012-03-06 Thread Ann Black
Hello -

I would also like the +1 this feature.  I currently use the clone
feature of a workflow to make a copy and modify, but if I change the
original workflow, I think have to remember which workflows I cloned into
and hand modify them as well.  If we had the ability to re-use workflows,
then we could develop modules that could be re-used in larger workflows.

Thanks much for the consideration,

Ann



--

Message: 3
Date: Thu, 01 Mar 2012 20:14:25 + (GMT)
From: thondeb...@me.com
To: Galaxy-dev galaxy-dev@lists.bx.psu.edu
Subject: [galaxy-dev] Using complete workflow in another workflow
Message-ID: 7d9b3791-1822-e517-b5b9-e1ba1579b...@me.com
Content-Type: text/plain; charset=utf-8; Format=flowed


Hi,

How far along are we about thinking about being able to re-use a complete
workflow as a workflow step in another workflow?

This would really allow us to modularize certain aspects of the analyses
and would allow us to re-use a workflow in another.

Barring that, a simple copy/paste from one workflow into another would
also really help...

Any plans in that direction?

Thanks

Thon?
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Re: [galaxy-dev] Using complete workflow in another workflow

2012-03-06 Thread Dannon Baker
This is definitely something we're looking to implement in Galaxy.  I started 
working on a proof of concept a while back for boxing workflows up as tools, 
but I have not had a chance to finish it yet.

What Thon suggests in terms of a simple copy/paste is interesting, and probably 
a far simpler first step that I'll look into.  I could imagine a configurable 
set of 'component' workflows that you could click and have the steps plopped 
into your existing workflow.

-Dannon

On Mar 6, 2012, at 10:25 AM, Ann Black wrote:

 Hello -
 
 I would also like the +1 this feature.  I currently use the clone
 feature of a workflow to make a copy and modify, but if I change the
 original workflow, I think have to remember which workflows I cloned into
 and hand modify them as well.  If we had the ability to re-use workflows,
 then we could develop modules that could be re-used in larger workflows.
 
 Thanks much for the consideration,
 
 Ann
 
 
 
 --
 
 Message: 3
 Date: Thu, 01 Mar 2012 20:14:25 + (GMT)
 From: thondeb...@me.com
 To: Galaxy-dev galaxy-dev@lists.bx.psu.edu
 Subject: [galaxy-dev] Using complete workflow in another workflow
 Message-ID: 7d9b3791-1822-e517-b5b9-e1ba1579b...@me.com
 Content-Type: text/plain; charset=utf-8; Format=flowed
 
 
 Hi,
 
 How far along are we about thinking about being able to re-use a complete
 workflow as a workflow step in another workflow?
 
 This would really allow us to modularize certain aspects of the analyses
 and would allow us to re-use a workflow in another.
 
 Barring that, a simple copy/paste from one workflow into another would
 also really help...
 
 Any plans in that direction?
 
 Thanks
 
 Thon?
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