Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-13 Thread Peter Cock
On Wed, Jun 12, 2013 at 3:06 PM, Berner, Thomas thomas.ber...@jki.bund.de wrote: Hi guys, another error appeared after we installed NCBI BLAST + to our local Galaxy instance and wanted to test it. After uploading some testdata to our history we tried to run blastn on it and got the

Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-13 Thread Nicola Soranzo
Il giorno gio, 13/06/2013 alle 18.06 +0100, Peter Cock ha scritto: On Thu, Jun 13, 2013 at 6:02 PM, Nicola Soranzo sora...@crs4.it wrote: There are two issues here, one that we would like to be able to handle multi-threading better via Galaxy configuration on a per-tool level, but for

Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-13 Thread Peter Cock
Resending as the mailing list was down: On Thu, Jun 13, 2013 at 6:02 PM, Nicola Soranzo sora...@crs4.it wrote: There are two issues here, one that we would like to be able to handle multi-threading better via Galaxy configuration on a per-tool level, but for now it must often be hard coded or

Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-12 Thread Björn Grüning
Hi Thomas, which wrapper did you use, the one from the toolshed or testtoolshed? Can you have a look at that thread please? http://dev.list.galaxyproject.org/Blast-Errors-td4659419.html Hi guys, another error appeared after we installed NCBI BLAST + to our local Galaxy instance and

Re: [galaxy-dev] blastn: Error: NCBI C++ Exception

2013-06-12 Thread Gianmauro Cuccuru
On 06/12/2013 04:06 PM, Berner, Thomas wrote: Hi guys, another error appeared after we installed NCBI BLAST + to our local Galaxy instance and wanted to test it. After uploading some testdata to our history we tried to run blastn on it and got the following error: Fatal error: Matched