Re: [galaxy-dev] exporting environment variables to SGE in galaxy

2011-07-30 Thread Chaolin Zhang
Hi Shantanu, Thanks for the information! This did the trick. Chaolin On Jul 30, 2011, at 1:28 AM, Shantanu Pavgi wrote: > > On Jul 29, 2011, at 11:28 PM, Chaolin Zhang wrote: > >> Hi, >> >> I am setting up SGE in our galaxy mirror. One problem I have is that I >> cannot export environment

Re: [galaxy-dev] exporting environment variables to SGE in galaxy

2011-07-29 Thread Shantanu Pavgi
On Jul 29, 2011, at 11:28 PM, Chaolin Zhang wrote: > Hi, > > I am setting up SGE in our galaxy mirror. One problem I have is that I > cannot export environment variables of the specific users running the galaxy > service. On command line, I did this by qsub -V script.sh. or add a line > #$