Hi Dan:
Thanks I have installed these test data managers...
I miss some of the features of the old system
e.g. lookup by name at ucsc or ncbi, automatic building of a specified set of
indices after download.
Are those cool features really gone now or did i miss something?
The second dialog (choose the source for the reference genome) is not at all
clear.
is this going to reorder what has been downloaded?
Is there a reason not to always use GATK - ( i think that means, by chr size,
descending)?
GATK is the only tool I know that is picky about reference order.
Brad
From: Daniel Blankenberg
Sent: Wednesday, February 26, 2014 2:58 PM
To: Langhorst, Brad
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] latest stable data management interface
Hi Brad,
Galaxy doesn't come with any Data Managers in the distribution, so you'll need
to install them from a toolshed. Here is the Data Manager category with with is
currently available in the test toolshed.:
http://testtoolshed.g2.bx.psu.edu/repository/browse_repositories_in_category?id=83f763caf629aa54
In the future we'll make the fact that there aren't any Data Managers installed
more obvious. Please let us know if you encounter further difficulties.
Thanks for using Galaxy,
Dan
On Feb 26, 2014, at 2:47 PM, Langhorst, Brad
mailto:langho...@neb.com>> wrote:
When i click on the manage local data link i only see this:
none of which is clickable.
?Am I doing something silly?
What am i missing?
Brad
___
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
___
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/