Re: [galaxy-dev] multiple file input not taken into account in workflows

2012-01-08 Thread Dannon Baker
Christophe,

This is an issue that was resolved in changeset 6368:52de9815a7c4.  The 
changeset hasn't made it into galaxy-dist yet, which I assume you're using, but 
that should happen very soon.  You could wait for the update, or if you'd like, 
you can pull the changes directly from galaxy-central and everything should 
work fine.

Thanks,

Dannon



On Jan 8, 2012, at 7:21 PM, Christophe Antoniewski wrote:

 Hi
 
 We recently deployed a new galaxy instance for production, under Apache2 and 
 postgresql. Although I am not familiar with postgresql, I followed the 
 instructions in the wiki and it seems overall to work.
 However, there is at least an obvious issue with this new instance :
 when running a workflow with multiple files in input, the job starts well 
 with the first file and proceeds until completion of the whole workflow, then 
 stops, not taking care of the other files defined in the multiple input, and, 
 more irritating, not reporting any bug (at least in the front).
 
 The local galaxy instance we've been running for 1 year now under SQlite and 
 the internal web server, is doing well in contrast, so that I suspect a 
 misconfiguration in postgresql, primarily, (I don't really see how Apache 
 could pervert this aspect, but I am not so much a geek so I may be wrong)
 
 I tried to find traces of the same issue in the forum but did not find 
 something yet.
 
 Any help / suggestion are welcome
 
 Cheers
 
 -- 
 Christophe
 
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Re: [galaxy-dev] multiple file input not taken into account in workflows

2012-01-08 Thread Christophe Antoniewski
Dannon,

This is so great to get a meanful answer 12 min after my post.

Thank you !

Chris


Le lundi 9 janvier 2012, Dannon Baker dannonba...@me.com a écrit :
 Christophe,

 This is an issue that was resolved in changeset 6368:52de9815a7c4.  The
changeset hasn't made it into galaxy-dist yet, which I assume you're using,
but that should happen very soon.  You could wait for the update, or if
you'd like, you can pull the changes directly from galaxy-central and
everything should work fine.

 Thanks,

 Dannon



 On Jan 8, 2012, at 7:21 PM, Christophe Antoniewski wrote:

 Hi

 We recently deployed a new galaxy instance for production, under Apache2
and postgresql. Although I am not familiar with postgresql, I followed the
instructions in the wiki and it seems overall to work.
 However, there is at least an obvious issue with this new instance :
 when running a workflow with multiple files in input, the job starts
well with the first file and proceeds until completion of the whole
workflow, then stops, not taking care of the other files defined in the
multiple input, and, more irritating, not reporting any bug (at least in
the front).

 The local galaxy instance we've been running for 1 year now under SQlite
and the internal web server, is doing well in contrast, so that I suspect a
misconfiguration in postgresql, primarily, (I don't really see how Apache
could pervert this aspect, but I am not so much a geek so I may be wrong)

 I tried to find traces of the same issue in the forum but did not find
something yet.

 Any help / suggestion are welcome

 Cheers

 --
 Christophe

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 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
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-- 
Christophe Antoniewski
1 rue du Dahomey
75011 Paris
+33 6 68 60 51 50
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