Hi David, numpy and scipy are not included as modules with the galaxy distribution, but you can use the repositories from the toolshed and depend on them.
http://toolshed.g2.bx.psu.edu/view/iuc/package_numpy_1_7 http://toolshed.g2.bx.psu.edu/view/iuc/package_scipy_0_12 An example usage is here: https://github.com/bgruening/galaxytools/blob/master/statistics/tool_dependencies.xml Hope that helps! Bjoern > Are numpy and scipy included with the standard python modules/eggs > supplied by galaxy? > > David Hoover > Helix Systems Staff > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
