Re: [galaxy-dev] rpy - No module named rpy CentoOs install

2011-09-06 Thread Nate Coraor
From: Nate Coraor [n...@bx.psu.edu] Sent: Friday, September 02, 2011 1:40 PM To: Joseph Hargitai Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] rpy - No module named rpy CentoOs install Joseph Hargitai wrote: additional info

Re: [galaxy-dev] rpy - No module named rpy CentoOs install

2011-09-02 Thread Nate Coraor
Joseph Hargitai wrote: additional info: it is possible on the same node to run manually ./gsummary.py with the header: #!/usr/bin/env python import sys, re, tempfile from rpy_options import set_options set_options(RHOME='/apps1/R/2.13.1/intel/lib64/R') from rpy import * Where

Re: [galaxy-dev] rpy - No module named rpy CentoOs install

2011-09-02 Thread Joseph Hargitai
[n...@bx.psu.edu] Sent: Friday, September 02, 2011 1:40 PM To: Joseph Hargitai Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] rpy - No module named rpy CentoOs install Joseph Hargitai wrote: additional info: it is possible on the same node to run manually ./gsummary.py

Re: [galaxy-dev] rpy - No module named rpy CentoOs install

2011-09-01 Thread Joseph Hargitai
additional info: it is possible on the same node to run manually ./gsummary.py with the header: #!/usr/bin/env python import sys, re, tempfile from rpy_options import set_options set_options(RHOME='/apps1/R/2.13.1/intel/lib64/R') from rpy import * Where else can there be an env setting to