Already reported in Trello
https://trello.com/c/o0S3klAF
Thanks for the fix!
Joachim Jacob
Rijvisschestraat 120, 9052 Zwijnaarde
Tel: +32 9 244.66.34
Bioinformatics Training and Services (BITS)
http://www.bits.vib.be
@bitsatvib
On 05/15/2013 03:19 PM, Joachim Jacob | VIB | wrote:
run_reports.sh dies silently.
Its last will in reports_webapp.log states:
Traceback (most recent call last):
File "./scripts/paster.py", line 33, in <module>
serve.run()
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line
1056, in run
invoke(command, command_name, options, args[1:])
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line
1062, in invoke
exit_code = runner.run(args)
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line
227, in run
result = self.command()
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py", line
650, in command
app = loadapp( app_spec, name=app_name, relative_to=base,
global_conf=vars)
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
line 350, in loadapp
return loadobj(APP, uri, name=name, **kw)
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
line 375, in loadobj
return context.create()
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
line 813, in create
return self.object_type.invoke(self)
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
line 249, in invoke
return fix_call(context.object, context.global_conf,
**context.local_conf)
File
"/home/galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
line 97, in fix_call
val = callable(*args, **kw)
File
"/home/galaxy/galaxy-dist/lib/galaxy/webapps/reports/buildapp.py",
line 61, in app_factory
add_ui_controllers( webapp, app )
File
"/home/galaxy/galaxy-dist/lib/galaxy/webapps/reports/buildapp.py",
line 33, in add_ui_controllers
from galaxy.web.base.controller import BaseUIController
File "/home/galaxy/galaxy-dist/lib/galaxy/web/base/controller.py",
line 23, in <module>
from galaxy.visualization.genome.visual_analytics import get_tool_def
File
"/home/galaxy/galaxy-dist/lib/galaxy/visualization/genome/visual_analytics.py",
line 3, in <module>
from galaxy.tools.parameters.basic import IntegerToolParameter,
FloatToolParameter, SelectToolParameter
File "/home/galaxy/galaxy-dist/lib/galaxy/tools/__init__.py", line
57, in <module>
from galaxy.visualization.genome.visual_analytics import
TracksterConfig
ImportError: cannot import name TracksterConfig
Anybody knowing the recipe to reanimate the patient? Thanks.
BTW, this is the first time I am starting up run_reports.sh after the
1 april/8 april update. Did not had this issue before.
Joachim
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
