contains tools
for display in the tool panel. I think you may be confusing Galaxy tools with
tool dependencies.
>
> Thanks!
> -Sheldon
>
> -Original Message-
> From: Briand, Sheldon
> Sent: Monday, March 03, 2014 2:16 PM
> To: 'Greg Von Kuster'
> S
per), I only have the package option and so I can't get the tool
to appear in my menu.
Thanks!
-Sheldon
-Original Message-
From: Briand, Sheldon
Sent: Monday, March 03, 2014 2:16 PM
To: 'Greg Von Kuster'
Subject: RE: [galaxy-dev] tool trouble
Hi,
Not sure if you were s
_
From: galaxy-dev-boun...@lists.bx.psu.edu [galaxy-dev-boun...@lists.bx.psu.edu]
On Behalf Of Briand, Sheldon [sheldon.bri...@ssc-spc.gc.ca]
Sent: Friday, February 28, 2014 6:02 PM
To: 'Greg Von Kuster'
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] tool trouble
Hi,
So tho
uster [mailto:g...@bx.psu.edu]
Sent: Friday, February 28, 2014 4:59 PM
To: Briand, Sheldon
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] tool trouble
Hello Sheldon,
What is the configuration setting you are using for the location to install
repositories? This is defined by the tool_path attrib
ly missed the migration
> step. I’ll try that first and report back.
>
> Cheers,
> -Sheldon
>
> From: Greg Von Kuster [mailto:g...@bx.psu.edu]
> Sent: Friday, February 28, 2014 11:04 AM
> To: Briand, Sheldon
> Cc: galaxy-dev@lists.bx.psu.edu
> Subject: R
be missing the .py and .xml files in the shed_tools directory.
-Sheldon
From: Briand, Sheldon
Sent: Friday, February 28, 2014 2:11 PM
To: 'Greg Von Kuster'
Subject: RE: [galaxy-dev] tool trouble
Hi,
Thanks for getting back to me.
I didn't get your first reply (email trouble her
Hello Briand,
This may take some back-and-forth with you to understand the steps you have
taken so far. Successfully installing a repository that contains tools usually
results in the tools being displayed in the Galaxy tool panel. However, there
may be issues that result in the tools not pro
Hi,
I've been poking around a bit more. It looks as though galaxy isn't actually
downloading and installing the tools. The tool status changes to installed in
the web interface and postgres but the tool is not present on disk. The log
below shows no download and make of the tool and dependanc
