Re: [galaxy-dev] variables not defined

2013-01-08 Thread MONJEAUD

Ok,

thanks for this information.

Cheers,
Cyril

On 01/08/2013 01:58 AM, Jeremy Goecks wrote:
These bugs have been fixed in our development repository 
(galaxy-central) and will be available in the next distribution, which 
should occur in the coming week.


Thanks,
J.


On Jan 7, 2013, at 6:23 AM, MONJEAUD wrote:


Hello all,

I am using my own Galaxy instance and I had a problem with page and 
visualization tabs.
For example, when I want to edit attributes of a page, I've got this 
error traceback :



|NameError: global name 'VALID_SLUG_RE' is not defined|


and when I want to remove or share a page or a visualization, I've 
got  this one :



|NameError: global name 'util' is not defined|


To fix these errors, I added in the 
lib/galaxy/webapps/galaxy/controllers/page.py and 
lib/galaxy/webapps/galaxy/controllers/visualization.py these lines :



from galaxy import util
import re
VALID_SLUG_RE = re.compile( "^[a-z0-9\-]+$" )


So, I want to know if you know these problems or if it's only for my 
instance of galaxy. Maybe some files (where these variables are 
defined) are not present in my own galaxy.


Cheers,
Cyril Monjeaud
--

Cyril Monjeaud
Equipe Symbiose / Plate-forme GenOuest
Bureau D156
IRISA-INRIA, Campus de Beaulieu
35042 Rennes cedex, France
Tél: +33 (0) 2 99 84 74 17
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--

Cyril Monjeaud
Equipe Symbiose / Plate-forme GenOuest
Bureau D156
IRISA-INRIA, Campus de Beaulieu
35042 Rennes cedex, France
Tél: +33 (0) 2 99 84 74 17

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Re: [galaxy-dev] variables not defined

2013-01-07 Thread Jeremy Goecks
These bugs have been fixed in our development repository (galaxy-central) and 
will be available in the next distribution, which should occur in the coming 
week.

Thanks,
J.


On Jan 7, 2013, at 6:23 AM, MONJEAUD wrote:

> Hello all,
> 
> I am using my own Galaxy instance and I had a problem with page and 
> visualization tabs.
> For example, when I want to edit attributes of a page, I've got this error 
> traceback : 
> 
>> NameError: global name 'VALID_SLUG_RE' is not defined
> 
> and when I want to remove or share a page or a visualization, I've got  this 
> one :
> 
>> NameError: global name 'util' is not defined
> 
> To fix these errors, I added in the 
> lib/galaxy/webapps/galaxy/controllers/page.py and 
> lib/galaxy/webapps/galaxy/controllers/visualization.py these lines :
> 
>> from galaxy import util
>> import re
>> VALID_SLUG_RE = re.compile( "^[a-z0-9\-]+$" )
> 
> So, I want to know if you know these problems or if it's only for my instance 
> of galaxy. Maybe some files (where these variables are defined) are not 
> present in my own galaxy.
> 
> Cheers,
> Cyril Monjeaud
> -- 
> 
> Cyril Monjeaud
> Equipe Symbiose / Plate-forme GenOuest
> Bureau D156
> IRISA-INRIA, Campus de Beaulieu
> 35042 Rennes cedex, France
> Tél: +33 (0) 2 99 84 74 17
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> 
>  http://lists.bx.psu.edu/

___
Please keep all replies on the list by using "reply all"
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