Re: [galaxy-dev] workflows are broken in current galaxy-central version

[Edward Kirton]

yup, works.  thanks for the prompt reply

On Thu, Jul 21, 2011 at 10:15 AM, Kanwei Li  wrote:

> Fixed on trunk, thanks for reporting!
>
> K
>
> On Thu, Jul 21, 2011 at 12:41 PM, Edward Kirton  wrote:
>
>>
>> URL: https://galaxy.jgi-psf.org/workflow/editor?id=3918559ba2a747d8
>> Module paste.exceptions.errormiddleware:*143* in __call__
>> Module paste.debug.prints:*98* in __call__
>> Module paste.wsgilib:*539* in intercept_output
>> Module paste.recursive:*80* in __call__
>> Module paste.httpexceptions:*632* in __call__
>> Module galaxy.web.framework.base:*145* in __call__
>> >>   
>> body *=* method*(* trans*,* kwargs *)*
>> Module galaxy.web.framework:*84* in decorator
>> >>   *
>> return* func*(* self*,* trans*,* ***args*,* kwargs *)*
>> Module galaxy.web.controllers.workflow:*686* in editor
>> >>   *
>> return* trans*.*fill_template*(* "workflow/editor.mako"*,* stored*=*
>> stored*,* annotation*=*self*.*get_item_annotation_str*(* trans*.*
>> sa_session*,* trans*.*user*,* stored *)* *)*
>> Module galaxy.web.framework:*661* in fill_template
>> >>   *
>> return* self*.*fill_template_mako*(* filename*,* kwargs *)*
>> Module galaxy.web.framework:*672* in fill_template_mako
>> >>   *
>> return* template*.*render*(* data *)*
>> Module mako.template:*296* in render
>> >>   *
>> return* runtime*.*_render*(*self*,* self*.*callable_*,* args*,* data*)*
>> Module mako.runtime:*660* in _render
>> >>   ***
>> *_kwargs_for_callable*(*callable_*,* data*)**)*
>> Module mako.runtime:*692* in _render_context
>> >>   
>> _exec_template*(*inherit*,* lclcontext*,* args*=*args*,* kwargs*=*kwargs*
>> )*
>> Module mako.runtime:*718* in _exec_template
>> >>   
>> callable_*(*context*,* ***args*,* kwargs*)*
>> Module _base_panels_mako:*87* in render_body
>> >>   
>> __M_writer*(*unicode*(*self*.*overlay*(*visible*=*self*.*overlay_visible*
>> )**)**)*
>> *TypeError: render_overlay() got an unexpected keyword argument 'visible'
>> *
>>
>> ___
>> Please keep all replies on the list by using "reply all"
>> in your mail client.  To manage your subscriptions to this
>> and other Galaxy lists, please use the interface at:
>>
>>  http://lists.bx.psu.edu/
>>
>
>
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Re: [galaxy-dev] workflows are broken in current galaxy-central version

[Kanwei Li]

Fixed on trunk, thanks for reporting!

K

On Thu, Jul 21, 2011 at 12:41 PM, Edward Kirton  wrote:

>
> URL: https://galaxy.jgi-psf.org/workflow/editor?id=3918559ba2a747d8
> Module paste.exceptions.errormiddleware:*143* in __call__
> Module paste.debug.prints:*98* in __call__
> Module paste.wsgilib:*539* in intercept_output
> Module paste.recursive:*80* in __call__
> Module paste.httpexceptions:*632* in __call__
> Module galaxy.web.framework.base:*145* in __call__
> >>   body
>  *=* method*(* trans*,* kwargs *)*
> Module galaxy.web.framework:*84* in decorator
> >>   *
> return* func*(* self*,* trans*,* ***args*,* kwargs *)*
> Module galaxy.web.controllers.workflow:*686* in editor
> >>   *
> return* trans*.*fill_template*(* "workflow/editor.mako"*,* stored*=*stored
> *,* annotation*=*self*.*get_item_annotation_str*(* trans*.*sa_session*,*
> trans*.*user*,* stored *)* *)*
> Module galaxy.web.framework:*661* in fill_template
> >>   *
> return* self*.*fill_template_mako*(* filename*,* kwargs *)*
> Module galaxy.web.framework:*672* in fill_template_mako
> >>   *
> return* template*.*render*(* data *)*
> Module mako.template:*296* in render
> >>   *
> return* runtime*.*_render*(*self*,* self*.*callable_*,* args*,* data*)*
> Module mako.runtime:*660* in _render
> >>   
> _kwargs_for_callable*(*callable_*,* data*)**)*
> Module mako.runtime:*692* in _render_context
> >>   
> _exec_template*(*inherit*,* lclcontext*,* args*=*args*,* kwargs*=*kwargs*)
> *
> Module mako.runtime:*718* in _exec_template
> >>   
> callable_*(*context*,* ***args*,* kwargs*)*
> Module _base_panels_mako:*87* in render_body
> >>   
> __M_writer*(*unicode*(*self*.*overlay*(*visible*=*self*.*overlay_visible*)
> **)**)*
> *TypeError: render_overlay() got an unexpected keyword argument 'visible'*
>
> ___
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>
>  http://lists.bx.psu.edu/
>
___
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/