Re: [galaxy-dev] Externalizing Galaxy config in docker-galaxy-stable

2015-08-05 Thread Björn Grüning
Hi Brian, Oksana, let's move this discussion to github and try to get something done for the next+1 release. 15.07/15.08 or what ever it will be is really close so I would like to not rush here. But as soon as we have release this version. We can try to get something in :dev that addresses these

Re: [galaxy-dev] Externalizing Galaxy config in docker-galaxy-stable

2015-08-05 Thread Björn Grüning
Thanks! @Brian please add your ideas and use cases so we can figure out a way how to support this :) Thanks, Bjoern Am 05.08.2015 um 16:26 schrieb Oksana Korol: Created issue #74, with reference to this discussion. Cheers, Oksana On Wed, Aug 5, 2015 at 9:52 AM, Björn Grüning

Re: [galaxy-dev] Externalizing Galaxy config in docker-galaxy-stable

2015-08-05 Thread Tiago Rodrigues Antao
On Tue, 4 Aug 2015 17:26:00 + Kandalaft, Iyad iyad.kandal...@agr.gc.ca wrote: As a supplement to Oksana's original inquiry, we, at AAFC, couple Galaxy to SGE and possibly a different grid engine in the future for job scheduling. The old-fashioned way of doing that is to unify storage

Re: [galaxy-dev] Externalizing Galaxy config in docker-galaxy-stable

2015-08-05 Thread Eric Rasche
Tiago, Some work is already in progress for that. Please see - http://wookoouk.github.io/galaxyFlavorGenerator/ - https://github.com/galaxyFlavorsGenerators/galaxyFlavorGenerator/ I don't believe it handles configuration of the cluster backend, but I'm sure that would be a good addition