Re: [galaxy-dev] Potential Hackathon proposal: RADSeq

2015-11-24 Thread mabernard
Dear all, I work on many RADSeq projects, and I'm using Stacks for doing this. I developpe(d) some scripts to describe the result, compute descriptive statistics So I'm really interested to participate to this Hackathon, to give autonomy to biologist. So I'm in to but not at the

[galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.

2015-11-24 Thread Shane Kelly
Hi, I am looking for a simple task scheduler to use with Galaxy and initially picked Torque, but since my server is a single box, Torque would appear to be overkill? Can I have any input from anyone who may have used it? Thanks for any response

Re: [galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.

2015-11-24 Thread Eric Rasche
I'd also recommend HTCondor. Very easy to set up on debian/ubuntu, apt-get has a quick questionnaire that gets you up and running. Cheers, Eric On 11/24/2015 11:46 AM, Björn Grüning wrote: > Hi Shane, > > would Slurm work for you? > > http://slurm.schedmd.com/ > > Cheers, > Bjoern > > Am

Re: [galaxy-dev] Potential Hackathon proposal: RADSeq

2015-11-24 Thread Björn Grüning
Am 24.11.2015 um 20:36 schrieb Tiago Antao: > On Tue, 24 Nov 2015 10:38:05 +0100 > mabernard wrote: > >> So I'm in to but not at the date you propose sorry. >> Is the possible the week before (between 7th and 11th) or 2 weeks >> later (between 29th to 1st)? >

Re: [galaxy-dev] Potential Hackathon proposal: RADSeq

2015-11-24 Thread Gildas Le Corguillé
Hi All, I have some knowledges about RADSeq ... at least about the bioinformatics part. This technology is growing up in my lab (marine science) and I'm involve in few of those projects. So I'm in! Gildas Le 23/11/2015 20:59, Tiago Antao a écrit : On Mon, 23 Nov 2015 18:03:05 + John