Re: [galaxy-dev] Troubleshooting BAM file upload issues

2016-03-25 Thread Amelia Ireland
Hi Christian, Thanks for the tip. I tried this, but to no avail. I think that if the problem was with the file ordering, I wouldn't be able to upload it successfully to other galaxy installations (e.g. the main Galaxy server, Galaxy install on my laptop). It seems as though the issue is either

Re: [galaxy-dev] Troubleshooting BAM file upload issues

2016-03-25 Thread Daniel Blankenberg
Hi Amelia, I’ve provided a patch below that will disable the html check, so you might be able to see the uploaded file content to help with debugging. Thanks, Dan $ git diff diff --git a/lib/galaxy/datatypes/sniff.py b/lib/galaxy/datatypes/sniff.py index ff9584d..5b608ee 100644 ---