[galaxy-dev] GCC2016: Register by this Saturday; Posters & Demos posted

2016-05-31 Thread Dave Clements
Hello all, Some GCC2016 news: - *On-time registration for GCC2016 ends this Saturday, June 4. *After that *late registration kicks in and rates go up 100%*. You don't want to pay that. (Training

Re: [galaxy-dev] tabular file displayed without tabs

2016-05-31 Thread Carl Eberhard
Strange. Alright, a few questions then: * Is this the only file that this happens to? Do other outputs from this tool produce the same sort of error? * Do you see any javascript errors in the console when attempting the viewing? (how to here: http://webmasters.stackexchange.com/a/77337) On Fri,

[galaxy-dev] Problem running bwa-mem

2016-05-31 Thread C. Ch.
Hi all, When running bwa-mem (installed version 0.7.12.1) I get an empty result with the stderr giving the following error: [main] Version: 0.7.12-r1039 [main] CMD: bwa mem -t 1 -v 1 -I 180 localref.fa /home/galaxy/galaxy/database/files/001/dataset_1958.dat

Re: [galaxy-dev] tabular file displayed without tabs

2016-05-31 Thread Dannon Baker
Sorry, I'm late to the thread -- one more question: How many columns are in the file? Galaxy will only display tabular datasets with fewer than 50 columns using the 'fancy' display which also loads the file incrementally and renders on demand. For very 'wide' files, Galaxy defaults to using the

[galaxy-dev] SFTP settings

2016-05-31 Thread Durdevic, Marija
Is there anyone who manage to setup SFTP for Glaxay and that can help me please??? ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use

[galaxy-dev] LDAP authentification

2016-05-31 Thread Durdevic, Marija
Can someone please be so kind to post auth_conf.xml file with all changes. I am trying to setup it, but unsuccessfully. Thanks in advance. Regards, Marija Mag. Marija Đurđević Core Facility Computational Bioanalytics Medical University of Graz Center for Medical Research Stiftingtalstraße 24,