[galaxy-dev] Local galaxy samtools HISAT 2 issue

2016-10-12 Thread evan clark
I am setting up a production galaxy server and am having an issue with running HISAT 2. It appears that it is not able to find samtools and renders an error within galaxy. Below is the error that it produces. I am unsure how to get the full error log for HISAT. |Traceback(most recent call last

[galaxy-dev] Job_id in a galaxy tool

2016-10-12 Thread Katherine Beaulieu
Hello Galaxy Community, Is it possible to get the job_id listed on the info 'eye' page within a tool wrapper? Katherine ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and

Re: [galaxy-dev] Galaxy Admin Training: November 7-11, Salt Lake City

2016-10-12 Thread Dave Clements
Hi All, On-time registration for the November Galaxy Admin Training in Salt Lake *ends this Sunday, October 16*. After Sunday rates go up quite a bit. There also a chance that the sessions will sell out before Sunday. So, if you are inte